Alternatives to `testing.measure()` for Performance Measurement in NumPy


import time


def time_it(func, *args, **kwargs):
    """This function measures the time taken to execute a function"""
    start_time = time.time()
    result = func(*args, **kwargs)
    end_time = time.time()
    return result, end_time - start_time


def large_array_creation():
    """This function creates a large NumPy array"""
    return np.random.rand(1000000)


# Measure the time taken to create a large array
result, time_taken = time_it(large_array_creation)

# Print the time taken
print(f"Time taken to create large array: {time_taken:.5f} seconds")

This code defines a time_it function that takes another function as input along with its arguments. It then uses the time.time() function to measure the time before and after the execution of the input function. The difference between these timestamps provides the execution time.



Using %timeit magic command

import numpy as np

%timeit np.random.rand(1000)  # Measure time for creating a small array
%timeit np.random.rand(100000)  # Measure time for creating a larger array

This code utilizes the %timeit magic command available in interactive Python environments like IPython. It executes the provided code snippet multiple times and reports the average execution time.

Using timeit module for more control

import timeit

def small_array_creation():
    return np.random.rand(100)

setup_code = "import numpy as np"  # Code to run before each test
number_of_executions = 1000  # Number of times to repeat the test

# Time the execution of small_array_creation function
time_taken = timeit.Timer(small_array_creation, setup=setup_code).timeit(number=number_of_executions)

# Print the average time
print(f"Average time to create small array: {time_taken / number_of_executions:.5f} seconds")

This code imports the timeit module and defines a function to create a small array. It then sets up the code to run before each test and specifies the number of repetitions. Finally, it uses timeit.Timer to measure the average execution time.

Comparing algorithms with timeit

import timeit

def method_a(data):
    # Implementation of algorithm A
    pass

def method_b(data):
    # Implementation of algorithm B
    pass

data = np.random.rand(10000)

# Measure time for both methods
time_a = timeit.Timer(lambda: method_a(data.copy())).timeit(number=100)
time_b = timeit.Timer(lambda: method_b(data.copy())).timeit(number=100)

# Print the comparison
print(f"Method A: {time_a:.5f} seconds, Method B: {time_b:.5f} seconds")

This code defines two methods (method_a and method_b) and creates a sample NumPy array. It then uses timeit.Timer to measure the execution time of each method on a copy of the data (to avoid modifying the original data in each run). Finally, it prints the comparison between the times.



  1. time module
    This is a versatile approach for measuring execution time. You can use the time.time() function to get timestamps before and after your code block, and the difference provides the execution time.

  2. %timeit magic command
    (available in interactive environments like IPython) This magic command executes a code snippet multiple times and reports the average execution time. It's a convenient way for quick comparisons.

  3. timeit module
    This module offers more control over the measurement process. You can define the number of times to repeat the execution, setup code to run before each test, and get more detailed statistics.

MethodDescriptionAdvantagesDisadvantages
time moduleBasic measurement using timestampsSimple and straightforwardLess control over repetitions and setup
%timeit magic commandConvenient for quick checksEasy to use in interactive environmentsLimited control, might not be suitable for complex measurements
timeit moduleProvides more control and detailed statisticsFlexible, allows customization of repetitions and setupRequires more code compared to the time module